How can I replace strings in a given column of a table using awk and regex?

I am studying bioinformatics, but I don’t have long experience with `awk and now I’m stuck. I have a table with 13 columns. In column 9 I have a lot of variations of strings like ‘ELL1-XXXXXXXXX’ (e.g. ‘ELL1-II_EC_cell1’) or ‘CDK8-XXXXXX’ (e.g. ‘CDK8-213_mCdk8_ChIPseq_Tnaive_stim_CDK8-214_mCdk8_ChIPseq_Tnaive_stim_AS’). I have >200 variations of the ‘ELL1-XXXXX’ string, which I would like to…

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Execution failed for task ‘:ofbiz’ – Gradle Process ‘command ‘C:\Program Files\Java\jdk1.8.0_171\bin\java.exe” finished with non-zero exit value 1

I am starting Ofbiz latest version 16.6 version. Getting following error. Have set Java path, OFBiz Home path. cd:\ofbiz>gradlew ofbiz Starting a Gradle Daemon (subsequent builds will be faster) Task :ofbiz FAILED Exception in thread “main” java.lang.NoClassDefFoundError: org/apache/commons/cli/ParseException at org.apache.ofbiz.base.start.Start.main(Start.java:60) Caused by: java.lang.ClassNotFoundException: org.apache.commons.cli.ParseException at java.net.URLClassLoader.findClass(URLClassLoader.java:381) at java.lang.ClassLoader.loadClass(ClassLoader.java:424) at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:349) at java.lang.ClassLoader.loadClass(ClassLoader.java:357) … 1 more…

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Permission difference with scp “dir -r”, “dir/*”, and “dir/file.txt”

Recently I have been getting an error when trying to scp into a CentOS Linux release 7.7.1908 (3.10.0-1062.4.3.el7.x86_64). These commands work: scp dir/file.txt . scp -r dir/file.txt . But this command has stopped working: scp dir/* . The error is: insecure scp option not allowed. This account is restricted by rssh. Allowed commands: scp What…

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How to create speech recognition object in JavaScript

I want to create a speech recognition object in JavaScript, but when I am going code this: const btn =document.querySelector(“.talk”); const containt=document.querySelector(“.containt”); const SpeechRec=window.SpeechRecognition||window.webkitSpeechRecognition; const recognition= new SpeechRecognition(); //Error in this line “ it gives an error that Uncaught ReferenceError: SpeechRecognition is not defined at script.js:6

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spring security data with index issues [closed]

trying to use method level security with spring data security. I have created a sample repo https://github.com/jayasai470/spring-data-security-sample/ when @Indexed is commented everything works fine and I can see in mongo debug logs that for the spel query @Query(“{tenantId: ?#{principal.tenantId}}”) tenantId is properly injected but when I try to include the @Indexed annotation server fails to…

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Best way to deserialize set of objects with TypeNameHandling when some $type are unknown

I’m currently using json.net to deserialize and instantiate a set of object coming from a REST service. This service give me many object types thus I have to use TypeNameHandling.Objects and a custom binder to match my assembly types. Example of response from the service: { “rows”:[ { “id”:”id1″, “doc”:{ “$type”:”Car”, “color”:”blue” } }, {…

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How to add css class field in Custom Taxonomy?

Hi this is my code for custom taxonomy register_taxonomy( ‘job_location’, ‘noo_job’, array( ‘labels’ => array( ‘name’ => __( ‘Job Location’, ‘noo’ ), ‘add_new_item’ => __( ‘Add New Job Location’, ‘noo’ ), ‘new_item_name’ => __( ‘New Job Location’, ‘noo’ ) ), ‘hierarchical’ => true, ‘query_var’ => true, ‘rewrite’ => array( ‘slug’ => _x( ‘job-location’, ‘slug’, ‘noo’…

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